PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29730
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 267aa    MW: 29554.7 Da    PI: 8.4437
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29730genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer109.61.6e-3447105259
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                  ++v YkeClkNhAas+GghavDGCgEfmps++++ +++++lkCaACgCHRnFHRre++e
     OIT29730  47 AAVAYKECLKNHAASIGGHAVDGCGEFMPSPDSTpSNPTSLKCAACGCHRNFHRREPAE 105
                  6799******************************9********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MELTCNSNPT KSTPDSENDT PPLIKPLSFS NGTLKNHHFH HQQPPCAAVA YKECLKNHAA  60
SIGGHAVDGC GEFMPSPDST PSNPTSLKCA ACGCHRNFHR REPAEDNSSP THFPSHFINF  120
RHHILPPIRR FSPSPSSSPP PPLHPQPITP KAEYNSSGRK RFRTKFTQEQ KEKMHSFSEK  180
LGWKLQKCDE AKVEEFCNEV GVGKGVLRVW MHNNKNTFGK KDVHNNTNGF NINGSSSNED  240
HNNNNNDSST NCGLHLHIST NGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.13e-51ZF-HD family protein