PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29850
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 237aa    MW: 26276.7 Da    PI: 8.1897
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29850genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-19102152255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+++AeIr+p +ng  +r++lg++ taeeAa a+++a+ +++g
  OIT29850 102 HYRGVRQRP-WGKFAAEIREPAKNG--ARVWLGTYETAEEAALAYDKAAYRMRG 152
               7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MYQPISTEFP VYHRTSSFSS LMPCLTDTWG DLPLKVDDSE DMVIYGFLSD ALTTGWTPYN  60
LTSTEIKAEP REEVEPATGP VTSVAPSAET TTAQAVVPKG RHYRGVRQRP WGKFAAEIRE  120
PAKNGARVWL GTYETAEEAA LAYDKAAYRM RGSKALLNFP HRIGLNEPEP VRLTVKRRSP  180
EPASSSISSA SENSLPKRRR KTVAAKQAEL EVQSRSNVMQ VGCQMEQFPV GEQLLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-54ERF family protein