PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30070
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 106aa    MW: 12274.2 Da    PI: 8.2203
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30070genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3444e-141496189
              EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
        B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89
              +f + +p +++k++ + l+k+ +e h+ +   s+  tl   +g++W+ +l  ++  +r  l +GWk+Fv +n+Lkeg +++F+l++  s+
  OIT30070 14 WFRINVPRSYSKRDHMFLSKSICEYHS-P---SMVQTLLRCKGKEWNATL--TGVVQR-RLVNGWKQFVVDNNLKEGSVLLFELVEAtSS 96
              677889999**************7774.3...45668999**********..666555.4788********************9976344 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MNANGWIEEE FYPWFRINVP RSYSKRDHMF LSKSICEYHS PSMVQTLLRC KGKEWNATLT  60
GVVQRRLVNG WKQFVVDNNL KEGSVLLFEL VEATSSAMIF AVEVLG