PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30074

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Protein Properties

Length: 295aa MW: 33390.4 Da PI: 4.4368

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30074	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.1	1.6e-18	95	185	1	87
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+l +sdv++++r+v+pkk ae++ ++k e++ +t+ d +g +W+++++y +++s++yvl+ ++ +Fv+ +gL++gD + ++++++ OIT30074 95 FDKQLQNSDVSSLRRIVVPKKAAERYlptlEIK--EGFPITMDDMDGiHVWSFRYRYwpNNSSRMYVLE-NTGDFVQTHGLRQGDYFALHYNDQ 185 89************************65544..7788****9*****888899999999.****************998754 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MAMTEAYGVM ADGNAALVAN TPTSMNGVFE AATPTDILNG QPYQTTKRSR SQRRRRSSIN 60 FGSLLDFPSF LSHVPPPPPM PVARALEPTG FRFLFDKQLQ NSDVSSLRRI VVPKKAAERY 120 LPTLEIKEGF PITMDDMDGI HVWSFRYRYW PNNSSRMYVL ENTGDFVQTH GLRQGDYFAL 180 HYNDQKQIYG IEARKAGDGA VFRGYEAEDM ILTDYAQTAD DGNGVLINEP ELDMSSFYFP 240 AMDNEMGMSF IYDTSFWNEP AFDFVGGPMT YYSTNVFPMP SFGSIEDSFS VDDFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	1e-54	B3 family protein

Link Out ? help Back to Top
Ensembl	OIT30074