PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30361

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 357aa MW: 41163.9 Da PI: 6.5074

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30361	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.9	2.4e-50	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +ppGfrFhPt+eel+++yL+kk++++k++l +vi evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++ + + OIT30361 11 VPPGFRFHPTEEELLHYYLRKKIASDKIDL-DVIGEVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYG-NCK 109 69**************************.9***********964444222455*********************************9.888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g++ktLvfykgrap+g k dW+mheyrl OIT30361 110 RIGMRKTLVFYKGRAPHGLKLDWIMHEYRL 139 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MNISVNGQSQ VPPGFRFHPT EEELLHYYLR KKIASDKIDL DVIGEVDLNK LEPWDIQEKC 60 KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYGNCKR IGMRKTLVFY 120 KGRAPHGLKL DWIMHEYRLD DNNTPQDAVN FCASESAAQE EGWVVCRVFK KKNYHKALEN 180 PQSSSVVSRT LIQNSNTDGV LDQILVYMGR SCNKEHDQTK HMTNIQQFNN NENIQFDTNM 240 QISSTGISEG RNFLHLRELE NHREVHQDCS FDEIMSSTGT DQHYSCMSNY HEERDIKADW 300 VALDRLVASQ LNGHLQTSSN NLYFPLSHEA KLTQNDVDDD VEFFTYAQSS PLSHLLV

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MNISVNGQSQ VPPGFRFHPT EEELLHYYLR KKIASDKIDL DVIGEVDLNK LEPWDIQEKC  60
KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYGNCKR IGMRKTLVFY  120
KGRAPHGLKL DWIMHEYRLD DNNTPQDAVN FCASESAAQE EGWVVCRVFK KKNYHKALEN  180
PQSSSVVSRT LIQNSNTDGV LDQILVYMGR SCNKEHDQTK HMTNIQQFNN NENIQFDTNM  240
QISSTGISEG RNFLHLRELE NHREVHQDCS FDEIMSSTGT DQHYSCMSNY HEERDIKADW  300
VALDRLVASQ LNGHLQTSSN NLYFPLSHEA KLTQNDVDDD VEFFTYAQSS PLSHLLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-103	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT30361