PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30374

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 389aa MW: 43402.3 Da PI: 5.0117

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30374	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	45.8	1.9e-14	38	118	30	128
NAM 30 leevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +vi + + y+++P++Lp + w+ s+++k + tk+g+Wka+g++ e+++ +++ g ++t+ f +++ap+g+kt W+m+ey++ OIT30374 38 D-DVIVD-NPYQYDPSNLP------DGAWFLVSSNEK---------KETKHGFWKAKGESCEIFA-NSAIYGWRTTFEFVEAQAPTGQKTVWMMQEYKI 118 4.44444.67888888887......234544444443.........45789************.999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MCPLAPAAPP PGLIGSCWSD DQIIFSLDQI NCGSPIPDDV IVDNPYQYDP SNLPDGAWFL 60 VSSNEKKETK HGFWKAKGES CEIFANSAIY GWRTTFEFVE AQAPTGQKTV WMMQEYKITQ 120 KEQHDHTKSK ESALCRVFSC SDENLNNERK PENINKVNNE TKPEHRYDDL DTLLLSLMPS 180 ITPHTSSNDG QRSIGEPQVK NQTEGIRPDH FDDDIVAELD CILREDYLEL NDLVGVASHS 240 SSSVNSSRQS LASDEYFDSM AILRDLDDEK NQDLHGKGST SNYRIMMCRR ANDVVMPPAP 300 LESYIGGSAA AAKDTQPGVS NKAKFPSKSS PEQDIKRLKA ECTNDEGPSH SYRAMASSSS 360 SSSSSHEPVA TREEKRKKKL KKFLCFMPF

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MCPLAPAAPP PGLIGSCWSD DQIIFSLDQI NCGSPIPDDV IVDNPYQYDP SNLPDGAWFL  60
VSSNEKKETK HGFWKAKGES CEIFANSAIY GWRTTFEFVE AQAPTGQKTV WMMQEYKITQ  120
KEQHDHTKSK ESALCRVFSC SDENLNNERK PENINKVNNE TKPEHRYDDL DTLLLSLMPS  180
ITPHTSSNDG QRSIGEPQVK NQTEGIRPDH FDDDIVAELD CILREDYLEL NDLVGVASHS  240
SSSVNSSRQS LASDEYFDSM AILRDLDDEK NQDLHGKGST SNYRIMMCRR ANDVVMPPAP  300
LESYIGGSAA AAKDTQPGVS NKAKFPSKSS PEQDIKRLKA ECTNDEGPSH SYRAMASSSS  360
SSSSSHEPVA TREEKRKKKL KKFLCFMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	9e-14	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT30374