PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30552
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 107aa    MW: 13067.1 Da    PI: 7.0697
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30552genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3345.1e-11686390
              EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
               vl+++++ +++ + +pk f e+      es   t+ + +g+ W +k+  + +++r ++++GWk F   n++k g  + F+l++ ++f
  OIT30552  6 EVLMKNSYITQDYMHIPKYFYEHLP----ESHSTTVLHYDGEPWFMKI--NMGKRR-WFKDGWKYFLMNNNIKWGWLINFELVEITQF 86
              5788999999999********5554....23357888999********..777666.79**********************9865665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MNPSFEVLMK NSYITQDYMH IPKYFYEHLP ESHSTTVLHY DGEPWFMKIN MGKRRWFKDG  60
WKYFLMNNNI KWGWLINFEL VEITQFCVIF QLHVTGRVTL QDPVEIN