PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30585
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 253aa    MW: 29271.3 Da    PI: 9.3611
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30585genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1881.4e-2737126191
      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
               +fYneYA+++GFs+rk++ +++k+ g +t+r+ +C keg+r ++k++ ++ +++r +tr+gC+a+++++++ +gk++++k++ eHnH+l p
  OIT30585  37 NFYNEYARRIGFSTRKKYVNTNKKLGYVTSRKITCFKEGFRGDDKRR-TQVKNPRRVTRIGCQAHVVITRQPSGKYRISKVDVEHNHSLLP 126
               6******************************************9999.9***************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MENVDKSEEV LPNKPQVYID FEPKLGIEFE SDDSAINFYN EYARRIGFST RKKYVNTNKK  60
LGYVTSRKIT CFKEGFRGDD KRRTQVKNPR RVTRIGCQAH VVITRQPSGK YRISKVDVEH  120
NHSLLPPSIV HMLPSHRKIN KVQAHEIDLA EDAGLMSKAT FDFMSLQAGG RESLGYTTQD  180
QKNYLRTKRQ KAMKEGEAGA LLKYFEKKRI EDPSFFFAVQ LDVDDMITNI FWADSKMIMD  240
YEIFGDVLSF DTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-60FAR1 family protein