PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30658
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 233aa    MW: 25748.7 Da    PI: 5.4295
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30658genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.8e-184596156
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
              + y+GVr++  + +Wv+e+r+p+    + kr++lg++ tae+Aa+a++ a+++l+g+
  OIT30658 45 PVYRGVRRRN-NDKWVCELREPN----TqKRIWLGSYPTAEMAARAHDVAALALRGN 96
              68*****887.8*********83....25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MMNNSSSSCS SVIRAEASDE EIILLASSKP KKRAGRKKFK ETRHPVYRGV RRRNNDKWVC  60
ELREPNTQKR IWLGSYPTAE MAARAHDVAA LALRGNLATL NFADSAWRLQ VPVSKDPKDL  120
RQAAARAAEA FWPGEETDVN SRGAANAGNG HEEMKAATEE NAANNCMQNV VTAENVLYSN  180
SCGEVGMFGT QEWQTNMEEG SLLSPNPCLL GSCFSWDDDV ESNVEVSLWS YSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.13e-34ERF family protein