PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30696
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 107aa    MW: 12534.6 Da    PI: 9.4697
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30696genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.25.3e-122098690
              ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
        B3  6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90
               + ++ k++ ++l+kk + ++  ++  s+  tl   +g++W+v+l  ++  +r  l +GWk+Fv +n+L+ g +++F+l++  s++
  OIT30696 20 FSRSYIKRDYMYLSKKIC-QYL-PP--STAKTLLRCNGNEWNVTL--TGVVRR-RLVNGWKQFVVDNKLNKGGVLLFELVEAtSSA 98
              4667788899********.773.32..235678899*********..444444.4889********************99764554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MNADGWIEEE EFYLWFRMKF SRSYIKRDYM YLSKKICQYL PPSTAKTLLR CNGNEWNVTL  60
TGVVRRRLVN GWKQFVVDNK LNKGGVLLFE LVEATSSAVI FVVEVQG