PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30779
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 174aa    MW: 19616.6 Da    PI: 9.0438
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30779genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer89.82.6e-28863457
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee..gtaaalkCaACgCHRnFHRrev 57
                   Y+eCl+NhAaslG++a+DGCgEf+ +++++  + + +l+CaACgCHRnFHR+  
     OIT30779  8 DIYRECLRNHAASLGSYATDGCGEFTLDDNNNnsSGSVSLHCAACGCHRNFHRKVI 63
                 57************************9977664345889**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MQGDKRNDIY RECLRNHAAS LGSYATDGCG EFTLDDNNNN SSGSVSLHCA ACGCHRNFHR  60
KVIYGASYSN NSSRDREIMA ADQLTDYAGG RTAEESPRSG KKRFRTKFTT DQKEKMLAFA  120
EKLGWTLQRK DQENETERFC REVGVSRKVF KVWMHNHKNN TSSVSTGNAS SLTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.17e-42ZF-HD family protein