PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30851

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

DBB

Protein Properties

Length: 296aa MW: 31984.8 Da PI: 4.9892

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30851	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.6	8.2e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC +C ++ H H++vpl OIT30851 4 QCNVCEVAEANVLCCADEAALCWSCDEKVHAAnklaskHQRVPL 47 7***999*******************66899999999986 PP
2	zf-B_box	26.5	1.4e-08	54	90	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg...H 37 +kC+ ++e +fC +++ llC++C ++H H OIT30851 54 IPKCDICQETVGYFFCLEDRALLCRKCDIAIH-TvnpH 90 689****99******************9.33452 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MKIQCNVCEV AEANVLCCAD EAALCWSCDE KVHAANKLAS KHQRVPLFGS SSSIPKCDIC 60 QETVGYFFCL EDRALLCRKC DIAIHTVNPH VSAHQRFLLT GVKVGLEPVD PGGASSSGTP 120 QSIQKVSEAE SAPLSKRNAS ISLDAQVNKV LPPQASGLGD FAPSKSPFAG GSAAGVPQWQ 180 FDEFIGLNDF NQNYEYMDYG ASRADSGKLG ESDSTSILRF EDEELDGDAC LGQVPDTSWA 240 VPQVPSPPTA SGVYWPKTYQ NPFDCSMFVP DISYSPSHNL QQRPPSGTSL KRRRQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-100	DBB family protein

Link Out ? help Back to Top
Ensembl	OIT30851