PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30980
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 251aa    MW: 28372.9 Da    PI: 6.6236
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30980genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-1867117256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g+
  OIT30980  67 IYHGVRKRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAAIAIKGH 117
               69****888.**********843...6**********************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEEKSLIFNN THNETTYSTI LHFSSSSSLS KRPTTLASQK QETNNKKTKC SDMNKKTKKI  60
DDLKHPIYHG VRKRSWGKWV SEIREPRKKS RIWLGTFATA EMAARAHDVA AIAIKGHLAL  120
LNFPELVHQF PKPASKCAKD IQAAATKAAA LNICSTNCIT EESQGELMEQ FSSEEIESRE  180
SSSSTSSLSC KNEDPFLDLP DLLLDLSQKF DKFCYYNSPW ELAGAESNDS NLSEVWSEDL  240
YLWDYNYGTV L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-34ERF family protein