PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30995
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 177aa    MW: 20264.8 Da    PI: 8.7161
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30995genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-192979155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+ +l+g
  OIT30995 29 PVYRGVRRRR-WGKWVSEIREPRK---KSRIWLGSFSSPEMAARAYDVAAYCLKG 79
              68*****777.**********843...6************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEKRQPPPSP AVNCRKIDVQ RGGSSTRHPV YRGVRRRRWG KWVSEIREPR KKSRIWLGSF  60
SSPEMAARAY DVAAYCLKGC NAQLNFPDEI ERLPRPITST ARDIQAAAAM AANNAKIVKK  120
KNQENCGSDD FWEEIELPEL KDGNDYNLYS EVWQWSFCNY GMFPSDNSTF INDDGVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.15e-39ERF family protein