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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT31121 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 309aa MW: 35105 Da PI: 4.3797 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 61 | 1.8e-19 | 83 | 136 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t++q++ Le+ Fe ++++ e++ +LAk+lgL+ rq+ +WFqNrRa+++
OIT31121 83 KKRRLTADQVQFLEKSFEVENKLEPERKDQLAKELGLQPRQIAIWFQNRRARWR 136
56789************************************************9 PP
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| 2 | HD-ZIP_I/II | 128.8 | 2.2e-41 | 82 | 173 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+++qv++LE+sFe e+kLeperK +la+eLglqprq+a+WFqnrRAR++tkqlE+dyeaL+++yd+lk++ +L ke+++Lr+++
OIT31121 82 EKKRRLTADQVQFLEKSFEVENKLEPERKDQLAKELGLQPRQIAIWFQNRRARWRTKQLENDYEALRNKYDNLKADYINLVKEKDDLRAQVI 173
69**************************************************************************************9985 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 309 aa Download sequence |
MAGPELFYGD AAGFNGILLQ NQRLMSSFAT KEAVGSPASF LASGSMVSFG GVNGGNISDR 60 SFFQSVEENE TDELEEYLHQ PEKKRRLTAD QVQFLEKSFE VENKLEPERK DQLAKELGLQ 120 PRQIAIWFQN RRARWRTKQL ENDYEALRNK YDNLKADYIN LVKEKDDLRA QVIQFTDMLL 180 HKEKEKGELA TSDIKELSDA SPKENMIDPV LEDEMSTLSA IALKQHKDLN SVKSDVFDSE 240 NLVQSSILDQ GDSSYAFEPD QSDLSQDEEE NLSKNLVAKV VHDHYPMTSS NLSCFGYPVE 300 DQGFGFWSF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G01470.1 | 1e-46 | HD-ZIP family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT31121 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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