PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31144
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 279aa    MW: 31362 Da    PI: 7.1356
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31144genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.13.7e-16191226134
      GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
               C +Cgt++  Tp++Rrgp g++tLCnaCGl ++ kg
  OIT31144 191 CIHCGTSSkdTPMMRRGPAGPRTLCNACGLTWANKG 226
               99*******************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MNSHIQALNV DNHFSAAGEE VPAGSDKAVD DFPIGYEGGV GALTLSFRGQ VFVFDGVTTH  60
KVQSVFQLLG GYEYSQGMQT VGLASPNQED SVDYPLLCAD PKRLESLIRF REKRKRRCYG  120
KKIRYDVRQE VAFRHTYLSP WHLPQFFVLG NWYSRLWNVN KIWMQRKNGQ FARKGSGEPK  180
QDDNPPEETW CIHCGTSSKD TPMMRRGPAG PRTLCNACGL TWANKGIMRN LYTASYDNTL  240
LTEPEDEDHS NSDYGAPPRY LSCQVSSSAS DSSDLAAQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.27e-51GATA family protein