PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT31623

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 619aa MW: 69916.9 Da PI: 4.6305

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT31623	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.5	1.9e-51	23	149	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 ppGfrFhPtdeelv +yLkkk+ +k++ l ++i+e+d+yk++P+dLp +k+k+++++w+fFs+rd+ky++ r+nratk+gyWkatgkd+ +++ ++++v OIT31623 23 PPGFRFHPTDEELVLYYLKKKICRKRILL-DAIAETDVYKWDPEDLPdlSKLKTGDRQWFFFSPRDRKYPNRARSNRATKHGYWKATGKDRIITC-NSRAV 121 9***********************999.99**********96559999*************************************.999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kktLvfykgrap ge+tdWvmhey++ OIT31623 122 GVKKTLVFYKGRAPVGERTDWVMHEYTM 149 **************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MKMLELIDSD SFACFGSSKN VFPPGFRFHP TDEELVLYYL KKKICRKRIL LDAIAETDVY 60 KWDPEDLPDL SKLKTGDRQW FFFSPRDRKY PNRARSNRAT KHGYWKATGK DRIITCNSRA 120 VGVKKTLVFY KGRAPVGERT DWVMHEYTMD EEELKRCQNV HDYYALYKVF KKSGPGPKNN 180 EQYGAPFREE DWVDDECPSA KVSVRRVDDE RPSAKASVSQ DTSAKHVNEA PSVDGGLEEL 240 LNNTADEAVL VEPLCADYDY ALEQLVYEED TESTLLDHSS REVNFPNHSA VIAPSCQQYH 300 VKESFDLTQS GTSQLQLHEA PEVTSAPVSR EQQRHVVEED FLEDYLEMND LLGPDPSIQN 360 FDNPELGVKN FDEAGPSGQN FDKPAGSFED LQFDYLDGLT EFDLYHDAPL LLDDIRTTDV 420 GQITEPYMNN FVNGAVNPVS TTYLSTFQNE MVNRQPMYLD NGEQISNQLW THDQRFNIYN 480 PSETNQLVVP PAISGVVYDS NLANHPMGAN QNQIVRQDDG TPSWFSSQLW AFVDSIPTTP 540 AAAAESPLVN GVFKRMSSFN KLRINARNMN VVAGNTVTSS SSGNSKNGVF YFSFLGILCA 600 ILCVLVGTFV KVFGRYISS

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MKMLELIDSD SFACFGSSKN VFPPGFRFHP TDEELVLYYL KKKICRKRIL LDAIAETDVY  60
KWDPEDLPDL SKLKTGDRQW FFFSPRDRKY PNRARSNRAT KHGYWKATGK DRIITCNSRA  120
VGVKKTLVFY KGRAPVGERT DWVMHEYTMD EEELKRCQNV HDYYALYKVF KKSGPGPKNN  180
EQYGAPFREE DWVDDECPSA KVSVRRVDDE RPSAKASVSQ DTSAKHVNEA PSVDGGLEEL  240
LNNTADEAVL VEPLCADYDY ALEQLVYEED TESTLLDHSS REVNFPNHSA VIAPSCQQYH  300
VKESFDLTQS GTSQLQLHEA PEVTSAPVSR EQQRHVVEED FLEDYLEMND LLGPDPSIQN  360
FDNPELGVKN FDEAGPSGQN FDKPAGSFED LQFDYLDGLT EFDLYHDAPL LLDDIRTTDV  420
GQITEPYMNN FVNGAVNPVS TTYLSTFQNE MVNRQPMYLD NGEQISNQLW THDQRFNIYN  480
PSETNQLVVP PAISGVVYDS NLANHPMGAN QNQIVRQDDG TPSWFSSQLW AFVDSIPTTP  540
AAAAESPLVN GVFKRMSSFN KLRINARNMN VVAGNTVTSS SSGNSKNGVF YFSFLGILCA  600
ILCVLVGTFV KVFGRYISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-120	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT31623