PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31711
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YA
Protein Properties Length: 201aa    MW: 22647.2 Da    PI: 8.8444
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31711genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.78.3e-33113169158
  CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                +ep++VNaKQy++Il+RRq+Rak+e+e+kl  k+rkpylheSRh hAl+R+Rg+gGrF
   OIT31711 113 EEPVFVNAKQYHGILRRRQSRAKAESENKL-LKARKPYLHESRHLHALKRARGCGGRF 169
                69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MTSSVHDLSD NSENEQQQKQ SELRTQFSSP ADGLSLRGTV PPNMHYLMPF QFGDANAMAQ  60
TAYPYPDPYY RSIFAPYDVQ PYPAQPYPAQ STVQLQLMGI QQVGIPLPSD TVEEPVFVNA  120
KQYHGILRRR QSRAKAESEN KLLKARKPYL HESRHLHALK RARGCGGRFQ SKKNDEYGDK  180
SQATVNIDSN KIEVTSSENA S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.27e-59NF-YA family protein