PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31804
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 243aa    MW: 27303.3 Da    PI: 5.1941
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31804genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.34.2e-06183227454
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               + n  E++RR ++++    L+ ++P +      +++ +++L +Av+Y+ksL
  OIT31804 183 TSNCSEKKRR-KLKKMVKALKGIVPGS-----SRMNTVSVLDEAVRYLKSL 227
               5689999998.7*************97.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MQSNYQFSPQ KPFFSPEDQA GGGNLLDIPS PSVFGTMALP TGFNPSVPVH GFEFQSSEAC  60
PKNFIIFDQT DYRSQIMFHP AMASKFPYPD LNFNATYFQD SMERKVANNE NTEVSSYLKE  120
DSADINALLS FEEEEHEEYD DEEVSTARTD ANYGNSSPES YSNYDCQSKK SRTTSFRKSS  180
GSTSNCSEKK RRKLKKMVKA LKGIVPGSSR MNTVSVLDEA VRYLKSLKVE VQKLGVENLK  240
TFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189193KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.11e-29bHLH family protein