PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31829
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 106aa    MW: 12168.2 Da    PI: 9.1542
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31829genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.59.9e-131897590
              -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
        B3  5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90
               +p +++ks+ +  pk+ + ++  + ++ +  tl   +g++W+v+l  ++  +r  l kGWk+Fv +n+Lk g +++F+l++  s++
  OIT31829 18 NVPISYMKSDHMHPPKSIC-QYL-P-PS-TVKTLLRCQGKEWNVTL--TGVVQR-RLVKGWKQFVVDNNLKKGSVLLFELVEAtSSA 97
              5677778888888788888.663.2.23.34577788*********..665555.4889********************99764554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MNANGWIEEE YYPWVRMNVP ISYMKSDHMH PPKSICQYLP PSTVKTLLRC QGKEWNVTLT  60
GVVQRRLVKG WKQFVVDNNL KKGSVLLFEL VEATSSAVIF VVEVLG