PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31939
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 230aa    MW: 25574.9 Da    PI: 4.9981
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31939genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.1e-1866116155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               + y+G+r++  r++Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  OIT31939  66 PVYRGIRRRN-RNKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 116
               68*****887.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDIFGNYNFD TLIPTQSTSL LPAESSTSSD SCSSGTLNYS DEEVMLASNY PKKRAGRKKF  60
RETRHPVYRG IRRRNRNKWV CEVREPNKKS RIWLGTFPTA EMAARAHDVA AIALRGRSAC  120
LNFADSAWRL PIPASAAAKD IQKAAAEAAE AFRPVESDGE NSREIIVDQV IQEVVAELPD  180
NVLFLDEEAL FYMPGLLANM AEGLMLPPPQ CIIDGYGMEA DHADISLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.13e-68ERF family protein