PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32116
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 126aa    MW: 14254.8 Da    PI: 5.1648
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32116genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.59.6e-11347345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      WT+   +++ +a +++ ++   +W+ Iar++g g+++++++ ++ 
         OIT32116  3 TWTAKQNKKFEEALALYDKDtsdRWNNIARCVG-GKSAEEVRRHYE 47
                     5********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MATWTAKQNK KFEEALALYD KDTSDRWNNI ARCVGGKSAE EVRRHYELLV KDIMQIENDQ  60
VPLPNYTTAG SDGRSYANEQ RYCNSLLLTQ ITYFAQTLQK YDQLDSFGGS DTSALAFLKG  120
PSNVTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.16e-34MYB_related family protein