PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32132
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 237aa    MW: 26081 Da    PI: 5.8226
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32132genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-183888155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  OIT32132 38 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 88
              59*****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MVKTEQKTLA AEASMSTMAL SSSNSNNNNN NNMKMKKKKY KGVRMRSWGS WVSEIRAPNQ  60
KTRIWLGSYS TAEAAARAYD AALLCLKGPS AANNLNFPFN SSFYHHIDLD HHTSTTLSPK  120
AIQRVAAAAA SAAEGAGVNV ENNVPSPPIS STSTSTNSSS PLSHEDQLDE VSLLPIFDHH  180
ATLEEETTTV SMMGQWYNFD SPKYNDMLHG TVFFDPPLMD EVYYEEGSAD IPLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-35ERF family protein