PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT32546

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 260aa MW: 29523.4 Da PI: 8.6071

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT32546	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.3	9.4e-30	23	77	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt++LH+ F +av+qLGG+e+AtPk il++m+++gLt+ hvkSHLQkYR+ OIT32546 23 KERLKWTQQLHDLFEKAVTQLGGPERATPKGILKVMGIEGLTIFHVKSHLQKYRM 77 68****************************************************8 PP
2	Myb_DNA-binding	54.3	3.1e-17	25	76	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++l+ +av+qlGg+ t+k I + mg +g+t ++ks++qky+ OIT32546 25 RLKWTQQLHDLFEKAVTQLGGPeraTPKGILKVMGiEGLTIFHVKSHLQKYR 76 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MPGKFKELLS SNMGSNRSDC SSKERLKWTQ QLHDLFEKAV TQLGGPERAT PKGILKVMGI 60 EGLTIFHVKS HLQKYRMSKF VREDPVIGKF ERRSISEILP NFSATAGAQL HEALQMHMDA 120 RRRLSDHLEV QRNLKMKLEA QGRFLDGIME ERKARASSSR LSCKSYSYSP LSLPSLCDEL 180 SESNVKELES DSEVDRNEIR SVDPECQARK RTLIHEDVIL SHRYNSNVAY SSLTSGAQNH 240 PYSSPHELPW STLASYDSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-46	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT32546