PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32582
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 306aa    MW: 34460.1 Da    PI: 8.1441
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32582genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.65.2e-3277133360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                   vrYkeClkNhAa++Gg+a+DGCgEfmps geegt++al C+AC+CHRnFHR+e e e
     OIT32582  77 IVRYKECLKNHAAAMGGNATDGCGEFMPS-GEEGTIEALICSACNCHRNFHRKEIEGE 133
                  68**************************9.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEIPSQEEEM PMPMPINSTY VGGGERHGHG HIIHHDPTTV PNNTNHIIPS SVANSINGPP  60
IEATPVSADH HVPYKKIVRY KECLKNHAAA MGGNATDGCG EFMPSGEEGT IEALICSACN  120
CHRNFHRKEI EGEQQLLQLP PPSSCDYYNL NRGGKKVYLG HSHNHHKSLL GPEQYGTVIP  180
SRATAPHHHQ MIMSYNNMGS LPSESEEHED INGGGVMTMA MARPLHHHNQ MVKKRFRTKF  240
TQEQKEKMFN FAEKVGWKIQ KQEETVVQQF CQELGIKRRV LKVWMHNNKH NLAKKNSSIT  300
IPQNQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.17e-75ZF-HD family protein