PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT32589

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 928aa MW: 103845 Da PI: 6.3505

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT32589	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.3	1.8e-29	612	663	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ OIT32589 612 AEKNITLQILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIQRWPSRKIKKV 663 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 928 aa Download sequence
MSMDERFVVT NTFLTTQFDT SMDLDYMDEL LLEGCFLETI DDRDFVHHRP SISNMPFDSS 60 FVWPTLLDAN GVESSGSPSK DGQQERQRSS FSKTLSISQF QELNSAKVQS FGENSISAMC 120 SSGQSENCLF DAPELSRRWW IGPNASSSVM DRLIQALGYI KNFSKDKDIL IQIWVPIYRD 180 GKRVLSTNDQ PFSLDLNCPR LAHYRQASLS YQFPANDDSK EIVGLPGRVF LDKVPEWTPD 240 VQYFQMEEYP RVGHAQQYNV RGTLAVPVFE QGSRNCLSVI EVVMTTRKIK YSSELESVCK 300 ALEAVDLRSS EVSSTLTAKA CDLAYQAALS EILEVLKSAC KTHGLPLAQT WVPCIQHGKG 360 GSRHSNVNLV RCVSTEDSAC YVADPRVQGF HEACSEHHLL KGQGVVGSAF MTNQPCFTAD 420 LTSYSKAEYP LSHYARMFGL HAAVAIRLRS MSTGSSDFVL EFFLPPNCRN PEEHKRMLTS 480 LSIIIQNVCQ TFRVVTDKEL QEEIVSLGEV TSLAASEYSE EVREQERKGS IVSSQERTSW 540 TSSHVEVQET SSVVSAFQDE TVEVLTEEPV TFRNQTNSGS ATTFAFSRNY RTSGEGISHT 600 WRKARDRRRL KAEKNITLQI LQQYFAGSLK DAAKSIGVCP TTLKRICRQH GIQRWPSRKI 660 KKVGLSLERI QRVINSVQGV SGTLQIESFY SDFPELASSN ISRSSLFVDP TSNNHLEDLN 720 RQPESGGNNA ATYKSVSSSC SQGSSSSQRS TGTQPHPYPS KVAGHEDPVV EEASDNHALK 780 RVNSDAELHL SSEALNPQPR SQSHASLTES PKSVSLSPVK KSLWRSQEGA PRIKVIHGEE 840 KIRFRMQKNW GYKELMREIV RRFGVDDPSG FHLKYLDDDS DWVLLTCEAD LEECIDVCWS 900 SQNQMIRLLF LCDSQPHLGS SFGSSSSL

Sequence ? help Back to Top

Protein Sequence Length: 928 aa Download sequence

MSMDERFVVT NTFLTTQFDT SMDLDYMDEL LLEGCFLETI DDRDFVHHRP SISNMPFDSS  60
FVWPTLLDAN GVESSGSPSK DGQQERQRSS FSKTLSISQF QELNSAKVQS FGENSISAMC  120
SSGQSENCLF DAPELSRRWW IGPNASSSVM DRLIQALGYI KNFSKDKDIL IQIWVPIYRD  180
GKRVLSTNDQ PFSLDLNCPR LAHYRQASLS YQFPANDDSK EIVGLPGRVF LDKVPEWTPD  240
VQYFQMEEYP RVGHAQQYNV RGTLAVPVFE QGSRNCLSVI EVVMTTRKIK YSSELESVCK  300
ALEAVDLRSS EVSSTLTAKA CDLAYQAALS EILEVLKSAC KTHGLPLAQT WVPCIQHGKG  360
GSRHSNVNLV RCVSTEDSAC YVADPRVQGF HEACSEHHLL KGQGVVGSAF MTNQPCFTAD  420
LTSYSKAEYP LSHYARMFGL HAAVAIRLRS MSTGSSDFVL EFFLPPNCRN PEEHKRMLTS  480
LSIIIQNVCQ TFRVVTDKEL QEEIVSLGEV TSLAASEYSE EVREQERKGS IVSSQERTSW  540
TSSHVEVQET SSVVSAFQDE TVEVLTEEPV TFRNQTNSGS ATTFAFSRNY RTSGEGISHT  600
WRKARDRRRL KAEKNITLQI LQQYFAGSLK DAAKSIGVCP TTLKRICRQH GIQRWPSRKI  660
KKVGLSLERI QRVINSVQGV SGTLQIESFY SDFPELASSN ISRSSLFVDP TSNNHLEDLN  720
RQPESGGNNA ATYKSVSSSC SQGSSSSQRS TGTQPHPYPS KVAGHEDPVV EEASDNHALK  780
RVNSDAELHL SSEALNPQPR SQSHASLTES PKSVSLSPVK KSLWRSQEGA PRIKVIHGEE  840
KIRFRMQKNW GYKELMREIV RRFGVDDPSG FHLKYLDDDS DWVLLTCEAD LEECIDVCWS  900
SQNQMIRLLF LCDSQPHLGS SFGSSSSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	OIT32589