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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT32723 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | MYB | ||||||||
| Protein Properties | Length: 338aa MW: 38383.6 Da PI: 8.2322 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 52.8 | 9e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd +l+d ++++G+g +W + +++ g++R++k+c++rw++yl
OIT32723 14 RGPWSPEEDAKLKDFIHKYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
89*********************************************97 PP
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| 2 | Myb_DNA-binding | 37 | 7.9e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +++eEd + + G++ W+ Ia+ ++ gRt++++k++w++
OIT32723 69 GDFSEEEDRVICSLYSTIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
689******************.*********.***********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 338 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDAKLKDFIH KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGD FSEEEDRVIC SLYSTIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGL 120 MQSTNQRKSP YFPAANSLQT QPQINSSLFR DLYYTPNNRP NITGLNQSIS SAQPNFLYTN 180 NSNMNFPNLG ATNNQYPYNI QSHNLLMFGE ASCSSSDGSC SQMSFGKEIK REEIMSNCLQ 240 QGQISSVNNA FEENHQNFTL DYGNSSSNWV DQKPNVYFGN TTTTQVLQYD NVEEVKQQLT 300 SCTNGNNGST IGCNNNNSMF VFNDENYNKS NEIEMFYY |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G57620.1 | 6e-81 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT32723 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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