PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32801
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 338aa    MW: 38392.6 Da    PI: 4.8454
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32801genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52.1e-12170213654
               HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
       HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  A++Y+k+L
  OIT32801 170 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDAIDYMKEL 213
               589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MELTQQDLLE ELLAPRRESW STFQSGVNEF FPNGWTFESP FYQNPEFVAL NSSLLGLITP  60
PESNFQCPLI TSPESYPLIL DSFTAPDNIN ETVLLPFQIQ EEYNNRAMVE NQEEVGIISS  120
DFHGLQEDLN SFSTNDVKVE EANSRIMGVS NVGEKKNKVK KLEGQPSKNL MAERRRRKRL  180
NDRLSMLRSI VPKISKMDRT SILGDAIDYM KELLEKIHTL REDDNVKDEI KDIKFVGNFK  240
ELKPNEAVVR KPPKFEVERR NVDTRIEICC AAKPGLLLST VSTLEALGLD VQQCVISCFS  300
DFSLQASCSE AREHRTILSS EDVKQTLFKT AGYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173180ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.16e-84bHLH family protein