PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32940
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 155aa    MW: 17611.7 Da    PI: 9.7195
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32940genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.1e-172069255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               y+G+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  OIT32940 20 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 69
              69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MVSMMEGEKR KQRQHQQDKP YRGIRMRKWG KWVAEIREPN KRSRIWLGSY SSPVAAARAY  60
DTAVFYLRGP TARLNFPECI VNDDRELHDL SAASIRKKAT EVGARVDALQ IAALHHNSSA  120
GSTESNSNSN INPRRVTIKP DLNEYPSPES CDEDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.16e-52ERF family protein