PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33210

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 236aa MW: 27107.5 Da PI: 8.9371

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33210	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.9	3.6e-32	157	215	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK vk+s +prsYYrCt+++C+vkk+++r ++d+++v++tYeg Hnh+ OIT33210 157 LDDGFKWRKYGQKAVKNSSHPRSYYRCTHHTCNVKKQIQRLSKDTSIVVTTYEGIHNHP 215 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MHYTSTSINA GEEPPPPPPP IPPPPLLSTD LSPANFFMQP NTSMLNNHLP LPNNSQVGCD 60 NIDWAGLFSS STTSGIDTEY FVHRTAPVNN NNEPTTMPNM SITPRNIMME GEQQQQQQQQ 120 HQQQQHDGYC RDKGKFRKRK YVPPRIAFHT RSTEDILDDG FKWRKYGQKA VKNSSHPRSY 180 YRCTHHTCNV KKQIQRLSKD TSIVVTTYEG IHNHPCEKLM ETLSPILKQL QFFARF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	1e-56	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT33210