PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33234

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 451aa MW: 51398.2 Da PI: 5.3523

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33234	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	140.4	1.1e-43	59	186	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 ppG+rF+Ptd+elv++yLk+k+++ +l + i e++iyk++P+ + + k ++eekewy ++rd+ky++g+r+nra+ +gyWkatg dk+++++k+ + OIT33234 59 PPGYRFNPTDSELVTYYLKRKLDNLPLYP-NRIYEINIYKYNPELIAAhvKPTTEEKEWYILTPRDRKYRNGNRPNRAAGDGYWKATGADKQIKDNKNVII 158 9***********************888.67**********85235556889**********************************9999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkk+Lv+y g+ pkg kt+W+mheyr+ OIT33234 159 GLKKSLVYYIGKPPKGDKTNWIMHEYRV 186 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MENHHSSSSP TNNANISKGN LTDQIPINEL PVTAVLSNNN KNGEITSAEE IDAYINNFPP 60 GYRFNPTDSE LVTYYLKRKL DNLPLYPNRI YEINIYKYNP ELIAAHVKPT TEEKEWYILT 120 PRDRKYRNGN RPNRAAGDGY WKATGADKQI KDNKNVIIGL KKSLVYYIGK PPKGDKTNWI 180 MHEYRVPDIP NLAERDINDW KLDEWVLCRI YKKSGRDNTM ITQRKRIRDA YETKTGRGNS 240 NDSVQDFNDD GQFGESSDGN LSNEFANITF EATSQDSTRH DSINCIQDTL HSNNRVPTFH 300 PQVPTRFGNF PKSCVPEFCD MPWSTTTAYD YQSCVPGFNE GFVTNDKFHY PPSPMKIEPI 360 SSMMANNNFI GQDDNMKSKG FGDIPCFSSC IGGYLGQDYE YMGLEKLDSG ELIDQYLVNC 420 EMVNSTMYLP EYNMKNLVNG ESSQSNTISG K

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MENHHSSSSP TNNANISKGN LTDQIPINEL PVTAVLSNNN KNGEITSAEE IDAYINNFPP  60
GYRFNPTDSE LVTYYLKRKL DNLPLYPNRI YEINIYKYNP ELIAAHVKPT TEEKEWYILT  120
PRDRKYRNGN RPNRAAGDGY WKATGADKQI KDNKNVIIGL KKSLVYYIGK PPKGDKTNWI  180
MHEYRVPDIP NLAERDINDW KLDEWVLCRI YKKSGRDNTM ITQRKRIRDA YETKTGRGNS  240
NDSVQDFNDD GQFGESSDGN LSNEFANITF EATSQDSTRH DSINCIQDTL HSNNRVPTFH  300
PQVPTRFGNF PKSCVPEFCD MPWSTTTAYD YQSCVPGFNE GFVTNDKFHY PPSPMKIEPI  360
SSMMANNNFI GQDDNMKSKG FGDIPCFSSC IGGYLGQDYE YMGLEKLDSG ELIDQYLVNC  420
EMVNSTMYLP EYNMKNLVNG ESSQSNTISG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	2e-54	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT33234