PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33342
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 291aa    MW: 33671.8 Da    PI: 6.8822
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33342genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.42.9e-5391341128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               lppGfrFhPtdeel+++yL+ +++++++++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s  ++ vg
  OIT33342   9 LPPGFRFHPTDEELIMYYLRYQATSRPCPV-SIIPEVDLYKFDPWELPEKAEFGENEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYS-ASKYVG 107
               79****************************.89***************99999*****************************************.9999** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
               +kk Lvfykg+ pkg+ktdW+mheyrl
  OIT33342 108 VKKALVFYKGKPPKGVKTDWIMHEYRL 134
               *************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MVGKISSDLP PGFRFHPTDE ELIMYYLRYQ ATSRPCPVSI IPEVDLYKFD PWELPEKAEF  60
GENEWYFFTP RDRKYPNGVR PNRAAVSGYW KATGTDKAIY SASKYVGVKK ALVFYKGKPP  120
KGVKTDWIMH EYRLNESRSQ PNKQSGSMRL DDWVLCRIYK KKNMGKTMEM MKAEEEESEA  180
QIEITNNDIE VVGATTNGPQ TNKLPRNCSL SHLLELDYFG SIPQLLGDNS YHTSFDNDQS  240
YTMNNVNTNV VHQMEKSQLG EVSHQHNSQN NNYNIFFNQQ PVFVNPAFQF Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-107NAC family protein