PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33450
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family C2H2
Protein Properties Length: 176aa    MW: 19739.9 Da    PI: 10.0229
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33450genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.000714668123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              ++C+ C+k+F++   L  H  +H
  OIT33450 46 FECKTCNKRFPSFQGLGGHRASH 68
              89*********999888888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MTGMKRSREE NMQVEAEAMA NCALMLLSRL NNNNTTSTDR DYHNEFECKT CNKRFPSFQG  60
LGGHRASHKR PKLLAGAGDF LVQSKKNKMH ECSICGMDQA LGGHMRRYRG EINKTSTAAE  120
KTMIPVAGKK MIPVLKKSNS SKRIFCLDLN LTPDVDVDLK LWPTAPVSSP VLRCFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.13e-33C2H2 family protein