PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33467
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 213aa    MW: 23811.7 Da    PI: 4.9643
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33467genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB169.83.1e-5334127295
     NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
               reqdrf+Pianv+rim+++lP +akis+d+ket+qecvsefisf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yre++g
  OIT33467  34 REQDRFMPIANVIRIMRRILPPHAKISDDSKETIQECVSEFISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYREFDG 127
               89*****************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSMGLSAHLN QAIAANTNNS ATNNSEQDSE CTIREQDRFM PIANVIRIMR RILPPHAKIS  60
DDSKETIQEC VSEFISFITG EANERCQREQ RKTITAEDVL WAMSKLGFDD YIEPLTLYLH  120
RYREFDGGER GSLRGEPLLM KRPMIDPASA SMTPMAPYQL PPFSIAHHHG YFAYPPPMGN  180
GYMQRDASNG SSSHGAVATV ENDVESLAEE GKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.21e-68NF-YB family protein