PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33491
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 269aa    MW: 31149.9 Da    PI: 4.4736
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33491genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM652.3e-20171472128
       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
               p+G  FhPtd e++ +yL + v++++l++++  ++++d+y + ePw++  +++   ++k  yf ++++k+++t +   r++ +g+Wk   k  +v++ kg+
  OIT33491  17 PMGNFFHPTDREVL-KYLLAFVRDEPLPCQNElMQQTDLYvEKEPWQIFDAYDDhgTNKTRYFITPQKKEKSTWRSVPRTVGKGTWKPLCKGLAVFDDKGR 116
               68999*******99.9**********99877669999998357*****74333321444669999999999999999************************ PP

       NAM  99 lvglkktLvfy.kgrapkgektdWvmheyrl 128
               l+g  k+L +   +++++ ++ +W+m ey+l
  OIT33491 117 LMGFVKSLKYIpANKSSNNVNGEWFMTEYSL 147
               ***********656888889*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MTYSDHRAMG CSSRYPPMGN FFHPTDREVL KYLLAFVRDE PLPCQNELMQ QTDLYVEKEP  60
WQIFDAYDDH GTNKTRYFIT PQKKEKSTWR SVPRTVGKGT WKPLCKGLAV FDDKGRLMGF  120
VKSLKYIPAN KSSNNVNGEW FMTEYSLYGC YVDAREIKNK GFVVCKIKKK ENPGNKEKGK  180
TVVNDENMRD VEEFINSALQ EDNYGMWKDD DDQKIIECIE GDEVGDQLLA LLGSEDNAEY  240
REWDEVEEDQ LANLMGSADD IDLDALEFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.11e-11NAC family protein