PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33499
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 215aa    MW: 24351.9 Da    PI: 4.9495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33499genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.47.9e-114792555
              HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
              +  +ErrRR+++ +++ eLr+l+P+      + ++K +i + A+ YI++Lq
  OIT33499 47 NLDAERRRRQKLSERLLELRSLVPNI-----TNMTKETIITDAITYIRELQ 92
              5579*********************6.....58*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MIIKCDKMEF PNAPYDDSNI SEGSKIGGKM DKRNQIEGEV KEYKSKNLDA ERRRRQKLSE  60
RLLELRSLVP NITNMTKETI ITDAITYIRE LQTNVNNLSE QLLEMEATHG EELETKSEEN  120
IDTAEEMANW GIEPEVQVAH IGTSKLWIKI VCQKKRGGFT KLMEAMNILG FDLNDTSVTA  180
SKGVFLVTSS VEVVRGGLID AHQIREILLE IIRGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.17e-36bHLH family protein