PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33617
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 235aa    MW: 26828.2 Da    PI: 6.3669
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33617genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-1659108255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr++    +Wv+eIr+p   +k+ r++lg+f t+e Aa+a++ a+++l+g
  OIT33617  59 FYRGVRRRN-GDKWVCEIREP---NKKSRIWLGTFTTPEIAARAHDVAALALRG 108
               7*****877.9*********9...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDFEDDQTSN SSCSSSDHDI IDKKKNFDLS SCSMNVIKPS LHNKRRTGRK KFKETRHPFY  60
RGVRRRNGDK WVCEIREPNK KSRIWLGTFT TPEIAARAHD VAALALRGTK ASLNFPESSW  120
SLPKAQSSSP RDIQIAALQV SNKEIVSSPL KHSMSYLELE ESSCFQSPKD DQENSSKGYN  180
DSCELMEFVD EEAMFNMPIL IDSMAEGMLM TPPAMKRGFN WGDVEENVEF TLWKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-43ERF family protein