PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33705

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 357aa MW: 42195.1 Da PI: 6.3595

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33705	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.7	8.4e-48	61	186	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 ppG+rF P+deel+ +yLkk+v +++l+ + ikev++yk+ P++L + ++kewyfF++rd+ky++g+r+nra+ +gyWkatg dk++++ ++ +vg OIT33705 61 PPGYRFCPHDEELIIHYLKKRVMNERLPH-DKIKEVNLYKYSPQELSeNYSMLGDKEWYFFTPRDRKYPNGNRPNRAAGTGYWKATGADKPIKH-NDIKVG 159 9************************99.88**********844444599***********************************.999* PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k Lvfy+g+ pkg kt+W+mhe+r+ OIT33705 160 FRKALVFYEGKPPKGDKTNWIMHEFRV 186 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MEFDEQTKAH LKANSQNPKI QELEKQKQVE DEKGLIIVKP NYNIISEISR VSYVDDSFIF 60 PPGYRFCPHD EELIIHYLKK RVMNERLPHD KIKEVNLYKY SPQELSENYS MLGDKEWYFF 120 TPRDRKYPNG NRPNRAAGTG YWKATGADKP IKHNDIKVGF RKALVFYEGK PPKGDKTNWI 180 MHEFRVNESR RLKRHAQDMR LDDWVLCRIY KKVDKSFKNA RKEQEQDDAS ISCSSIGKME 240 NCDYEGTTDS YEIARQNLTL PHHYDITFDD PGFNMDYNKY SLDNFSNYGP RSNYGMPLQP 300 SFSPGNIFWD QKGYQENCNL FPMHFDVNNF YQDSYDEIQS QNILDSVLDE NSSIYKD

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MEFDEQTKAH LKANSQNPKI QELEKQKQVE DEKGLIIVKP NYNIISEISR VSYVDDSFIF  60
PPGYRFCPHD EELIIHYLKK RVMNERLPHD KIKEVNLYKY SPQELSENYS MLGDKEWYFF  120
TPRDRKYPNG NRPNRAAGTG YWKATGADKP IKHNDIKVGF RKALVFYEGK PPKGDKTNWI  180
MHEFRVNESR RLKRHAQDMR LDDWVLCRIY KKVDKSFKNA RKEQEQDDAS ISCSSIGKME  240
NCDYEGTTDS YEIARQNLTL PHHYDITFDD PGFNMDYNKY SLDNFSNYGP RSNYGMPLQP  300
SFSPGNIFWD QKGYQENCNL FPMHFDVNNF YQDSYDEIQS QNILDSVLDE NSSIYKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-64	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT33705