PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33740
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 302aa    MW: 35206.4 Da    PI: 5.2522
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33740genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.21.2e-47221472128
       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               ppG+rF P+d+el+v+yLkkkv +++l+  + ikev+++ + P++L  +    +ekewyfF++rdkky +g+r+nra+ +gyWkatg d+++ + +g+ vg
  OIT33740  22 PPGYRFCPRDDELIVHYLKKKVMNEPLPS-NEIKEVNLCMHSPQQLSeTYPVVGEKEWYFFTPRDKKYINGTRPNRAAGTGYWKATGADRPINH-NGSIVG 120
               9***************************9.67**************8334445899**************************************.999*** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                +k Lvfy+g+++kg+kt+W+mheyr+
  OIT33740 121 FRKALVFYHGKRQKGKKTNWIMHEYRV 147
               *************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MESDKQIQAN FKVDVYDSLD FPPGYRFCPR DDELIVHYLK KKVMNEPLPS NEIKEVNLCM  60
HSPQQLSETY PVVGEKEWYF FTPRDKKYIN GTRPNRAAGT GYWKATGADR PINHNGSIVG  120
FRKALVFYHG KRQKGKKTNW IMHEYRVNES RVERKDGNTW RLDSWVLCRI YQKVDKSLKT  180
IGRELNSPLS INDQVGMDCD YEGTTDSIGT DTTFEENVQL LDISDNSSDI LVDSSIKKFA  240
KLNVDYAYPL HDEANFNMAQ ENFTWNDFTS DYMNDVQWDF PSWQENCLLP LEYHNINSFP  300
GI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-58NAC family protein