PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34229
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 242aa    MW: 27150 Da    PI: 6.966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34229genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.5e-053684153
              CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
       HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
              +r+ + erE+  R+++N+ f  L   l  +     + + Ka+iL ++ +++k+
  OIT34229 36 KRVHKAEREKLKREHLNELFLDLANALELS----EQTNGKASILNETARFVKD 84
              79999**********************998....68899999***99999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGAESPTSSA ENGGIAVETS PNGSLPCKKI RKKVPKRVHK AEREKLKREH LNELFLDLAN  60
ALELSEQTNG KASILNETAR FVKDMISQIK HLKRENTALL SESQYLSMEK KELQDDNSTL  120
EAQIGKLESE IKERVAETNL DLNLSLPETQ LPQLASQVTD NFLRLPGSEH PFQQMQMMNP  180
LYVVPLNSTP QAYPQPDNAK PAAMPTYSVK KPQARYPTPV DVWPSQILEK RPQLGQEVQI  240
SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.24e-44bHLH family protein