PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34437
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 249aa    MW: 27706.3 Da    PI: 5.0889
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34437genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.4e-181665255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +ykGVr +k +g+Wv+e+r p++   r r++lg+++tae+Aa+a +aa  +l+g
  OIT34437 16 KYKGVRLRK-WGKWVSEVRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRG 65
              8******99.*******999833...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEGQSENQNQ RNESIKYKGV RLRKWGKWVS EVRLPNSRER IWLGSYDTAE KAARAFDAAQ  60
FCLRGPNAKF NFPENPPDIS GGHKLSPAEI QVVAAQFGNE YVHPQTTAQE TPPSHVQNTH  120
MLKMENEEMS QSSTCNHDLM GQMDNTTTTT VDWSFLDMLE NYPNNAAAGG APPPHISSLP  180
PAAPPSPTVG TNNFDFGYYP GLETLSSNLY SPLHFPTRTA TGNGDEHGYE DSGINGDEHF  240
SQHSYLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-46ERF family protein