PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34558
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 238aa    MW: 25527.8 Da    PI: 9.3622
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34558genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.72e-202878256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+tae+Aa+a++aa+++++g+
  OIT34558 28 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEDAARAYDAAAREFRGA 78
              6********.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MAPKEKGTAA MPTVTAAGKV NGVSKEVHYR GVRKRPWGRY AAEIRDPGKK SRVWLGTFDT  60
AEDAARAYDA AAREFRGAKA KTNFPILEPE IVKLPNGNRS PSQSSTVENS PPVMPENSPP  120
AVMLDASPLN LSLGGSGSLF SNGVGRFLFQ NHLFHGSPVA GGMTPVNHVY YLEALQREQV  180
ISSYQKSCRK TAEFIAGCGG GASGESDSSS VIDFMGHDLK PTTRPINLDL NLPPPENM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.12e-32ERF family protein