PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT34621

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 247aa MW: 28114 Da PI: 9.7031

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT34621	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.4	3e-49	16	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+++d++k++PwdLp e+e yfFs+r+ k+++g+r+nrat+sgyWkatg dk+++s+ k++l OIT34621 16 LPPGFRFHPTDEELVVQYLKRKVFSFPLPA-SIIPDIDVHKSDPWDLPGD---LEQERYFFSTREMKHPKGNRSNRATNSGYWKATGLDKQIVSSrgKQQL 112 79**************************.89***********54...46799********************************9666677 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfykg+ +g +tdW+mheyrl OIT34621 113 VGMKKTLVFYKGKPLHGCRTDWIMHEYRL 141 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MGMEKLNFVK IGGVRLPPGF RFHPTDEELV VQYLKRKVFS FPLPASIIPD IDVHKSDPWD 60 LPGDLEQERY FFSTREMKHP KGNRSNRATN SGYWKATGLD KQIVSSRGKQ QLVGMKKTLV 120 FYKGKPLHGC RTDWIMHEYR LANLESNNIP TQENWVLCRI FLKKRGGSKK EDENMKQMLN 180 TTSCRAGGKS KLVFYDFMNS WVPGCSSSVS GSSGITELST NESDEHEDSS SCNSFTTSIR 240 RKNMAVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	8e-93	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT34621