PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34881
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 216aa    MW: 23731.2 Da    PI: 4.9402
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34881genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55.3e-163584255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               ykGVr++  +g+WvAeIr+p   + r  r +lg+f t  +Aa a++a + kl+g
  OIT34881 35 TYKGVRQRT-WGKWVAEIREP---N-RgPRLWLGTFETSHDAAMAYDAVAHKLYG 84
              69****999.**********8...2.35************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MSHCSAEKKT MKISQATSRK GCMRGKGGPE NASCTYKGVR QRTWGKWVAE IREPNRGPRL  60
WLGTFETSHD AAMAYDAVAH KLYGDNAKLN FPHMNTKSQA QNSTGSSSST YSTGVPETVK  120
MENESLFFNN DFESSCYSGG QASFPLPDNK KVEEDNNDEG VGVGGMWEDL NVNLPEIDDS  180
SIWAEAKATT LFQAVNEPGM FSGNLGDGIE YPPWYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-49ERF family protein