PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35000
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GRAS
Protein Properties Length: 530aa    MW: 58987.2 Da    PI: 6.398
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35000genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS377.41.8e-1151575291374
      GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svsel..ykalppsetseknsseelaalklfsevsPilkfshlta 98 
               lv+lL++cAeav+ +d+++a+ lL++l+  a   g+++qR+a++f+++La rla  +  ++  y a p+ +++++  +++  al l++e++P ++f+h++a
  OIT35000 157 LVQLLITCAEAVACRDKSRASVLLSELRASALVFGTSFQRVASCFVQGLADRLALvQPLGTvgYCATPAMNKTDMALEKKEEALGLLYEICPHFQFGHFVA 257
               689*************************************************9983222331144445555555558888899999*************** PP

      GRAS  99 NqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
               N  Ilea+ege+ +H++D+++s    +G QW  L+q+L++Rp++pp +lRiT+vg+    + e+ + +g+ L+ +A++lg+++ef++ v+++le+l+++++
  OIT35000 258 NCSILEAFEGESLIHVVDLGMSvglpHGHQWRRLIQSLTNRPGQPPrRLRITAVGE----NIEKFQIIGDELEAYARSLGINLEFSA-VESNLENLKPKDI 353
               *******************9884444678*************877779********....99*************************.79*********** PP

      GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
               +v  gE+l+Vn++lqlh +++es    +   +vL++v +lsPk++v+veq+++hn++ Fl rf+eal+yysa+fdsl++ lp+ +  r+k+E++++++ei+
  OIT35000 354 KVYDGEVLVVNSILQLHCVVKESRGALN---SVLQVVHELSPKILVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDVMLPKYDTRRAKIEQFYFAEEIK 451
               ********************88877777...8********************************************************************* PP

      GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
               n+v+ceg +r+erhe++ +Wr+r+++aGF+++p   k+++qak  l+kv+  +g+++ ee+g+lvlgWk++p+v++S+W+
  OIT35000 452 NIVSCEGPARVERHERVDQWRRRMSRAGFQAAPT--KMVSQAKQWLAKVNaYEGFTITEEKGCLVLGWKSKPIVAASCWK 529
               *******************************996..689****************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    
MTYDMVTGFL SLEPFNGDQI GYDPLVNGLY LSHKELAYSL NPYTAVFKRN AASIVSTLSD  60
ESGDFKRLRR TPSVGESLGS NSISFYSDSS SSSSGGGSSI PRNDSTNSVN SLHFAPRLHF  120
RDHVWALNQR YLAAEAIEEA AADIINQEEE NEEGMKLVQL LITCAEAVAC RDKSRASVLL  180
SELRASALVF GTSFQRVASC FVQGLADRLA LVQPLGTVGY CATPAMNKTD MALEKKEEAL  240
GLLYEICPHF QFGHFVANCS ILEAFEGESL IHVVDLGMSV GLPHGHQWRR LIQSLTNRPG  300
QPPRRLRITA VGENIEKFQI IGDELEAYAR SLGINLEFSA VESNLENLKP KDIKVYDGEV  360
LVVNSILQLH CVVKESRGAL NSVLQVVHEL SPKILVLVEQ DSSHNGPFFL GRFMEALHYY  420
SAIFDSLDVM LPKYDTRRAK IEQFYFAEEI KNIVSCEGPA RVERHERVDQ WRRRMSRAGF  480
QAAPTKMVSQ AKQWLAKVNA YEGFTITEEK GCLVLGWKSK PIVAASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.16e-76GRAS family protein