PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT35044

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 548aa MW: 62267.5 Da PI: 5.5619

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT35044	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.4	2.2e-56	6	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s + + OIT35044 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPdKsLLPSKDMEWYFFSPRDRKYPNGTRTNRATKAGYWKATGKDRKVNS-QMRP 104 79**************************.99**********96435566888**********************************9.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 +g+kktLv+y+grap+g++t Wvmheyrle OIT35044 105 IGMKKTLVYYRGRAPHGTRTGWVMHEYRLE 134 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPDKSLLPSK 60 DMEWYFFSPR DRKYPNGTRT NRATKAGYWK ATGKDRKVNS QMRPIGMKKT LVYYRGRAPH 120 GTRTGWVMHE YRLEERECEV ANGMQDAYAL CRVFKKSLNA PKIGDHYASA ASDRSSSIDV 180 YTEGSRFDDM DQSSDYGMRS AATSSSMAVH ASPLMNAAGP SHDDKWMQYL SDEAFTSINP 240 SFPTSNGAFP YHPSKVDIAL ECARLQHRFA LPPLEVQDFP QVGYVDSQSN DHLMYHQSTN 300 QTDIVQEILS VAQASHDLTN QDSWGGIYNY APPTDDFSFL PHNNIQIHDL GNSFNFMDQL 360 KEDHNDRSIA VSDFDDKTFF EDYKTVPIEN ISGPHKEEQD LQGEANGMHN SLNEREANNF 420 SLGFGNDSFL DDEDTDGFSN SPSFEVYEKI EVSQGLFVAT RQAANTFYHQ VVPSKTVTVH 480 RDLVPVLVHD FPIRKIQENS TLLDTLMAFS RKTLSGVMRV TRPWKGKVSS WVDMIAPLYT 540 FWSILGIA

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPDKSLLPSK  60
DMEWYFFSPR DRKYPNGTRT NRATKAGYWK ATGKDRKVNS QMRPIGMKKT LVYYRGRAPH  120
GTRTGWVMHE YRLEERECEV ANGMQDAYAL CRVFKKSLNA PKIGDHYASA ASDRSSSIDV  180
YTEGSRFDDM DQSSDYGMRS AATSSSMAVH ASPLMNAAGP SHDDKWMQYL SDEAFTSINP  240
SFPTSNGAFP YHPSKVDIAL ECARLQHRFA LPPLEVQDFP QVGYVDSQSN DHLMYHQSTN  300
QTDIVQEILS VAQASHDLTN QDSWGGIYNY APPTDDFSFL PHNNIQIHDL GNSFNFMDQL  360
KEDHNDRSIA VSDFDDKTFF EDYKTVPIEN ISGPHKEEQD LQGEANGMHN SLNEREANNF  420
SLGFGNDSFL DDEDTDGFSN SPSFEVYEKI EVSQGLFVAT RQAANTFYHQ VVPSKTVTVH  480
RDLVPVLVHD FPIRKIQENS TLLDTLMAFS RKTLSGVMRV TRPWKGKVSS WVDMIAPLYT  540
FWSILGIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-139	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT35044