PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT35080

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 910aa MW: 101351 Da PI: 7.1167

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT35080	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.6	5.9e-29	591	641	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ OIT35080 591 EKSISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 641 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 910 aa Download sequence
MEDGPFTLHD MFTKLSSDNT ISTSDFSEFL SDGFWLETTN HPSNFLTPSS LASQPLLLDT 60 INAGHSLPTT NREETDQDKI LFAQMDDFSP TRRENSETSP RRLWIGPNIN PNPTLSVKKR 120 LVQAIEHLKD STRDKDVLIQ IWVPVKRGGK HVLITNNQPY FLNPNFQSLV EYRYVSQTYQ 180 FAAEKDSKEL VGLPGRVFLK KLPEWTPDVR FFKREEYPRV NHAHQYNVRG SIAVPVFETG 240 SGTCLGVVEI VTTTQKTHYH PELEDVCKAL EAVNLRSSGI SNPAKIKDCN ESYLAALAEI 300 QYILTCVCDT HKLPLAQTWA PCIQQGKGGC LQSDENFPSC VTTVDEACYV RDPQVLPFHY 360 ACSEHHLLKG EGVAGGAFNT NQPCFATDIT AFSKTEYPLS HHARMFGLCS AVAIRLRSIY 420 TGSADFVLEF FLPLDCKNTE DQKQMLSSLS SVIQQSCRSL RVVTDQELQE EKELLQREKV 480 SLSAGESHEE ISRKPVSPPY RDQDASSWLS QMMDVQRKGK GAAVSQEENF KVTANHWRES 540 IHASTYSEPN QIQDNFGPKG GSGGSLDFSS GTGSHSSGAK RTGERRRSKT EKSISLQVLR 600 QYFAGSLKDA AKSIGVCPTT LKRICRQHGI TRWPSRKIKK VGHSLQKLQL VIDSVHGAEG 660 AIKLSSFYTN FPELTSPNNP GTSNLSASKN HDHMQQVNTQ PDGSTLSPDT ATSKSTSSSG 720 SHNSSSSLFC STGSKHLFPV TNVFSTGNAT MEEHPGGMLK RAHTEAESHD MGQEETKLLV 780 RSQSQKVQSN HISLEPLCPL PTSSNQVIRD SATFKVKATF GKEKIRFSLQ SHWGFIDVQQ 840 EVLRRFNIED GKIDLKYLDD DDEWVLLTCD ADLEECIDIH RLCKRRTIKI SLHHAYHPNL 900 GSSFGSSGPA

Sequence ? help Back to Top

Protein Sequence Length: 910 aa Download sequence

MEDGPFTLHD MFTKLSSDNT ISTSDFSEFL SDGFWLETTN HPSNFLTPSS LASQPLLLDT  60
INAGHSLPTT NREETDQDKI LFAQMDDFSP TRRENSETSP RRLWIGPNIN PNPTLSVKKR  120
LVQAIEHLKD STRDKDVLIQ IWVPVKRGGK HVLITNNQPY FLNPNFQSLV EYRYVSQTYQ  180
FAAEKDSKEL VGLPGRVFLK KLPEWTPDVR FFKREEYPRV NHAHQYNVRG SIAVPVFETG  240
SGTCLGVVEI VTTTQKTHYH PELEDVCKAL EAVNLRSSGI SNPAKIKDCN ESYLAALAEI  300
QYILTCVCDT HKLPLAQTWA PCIQQGKGGC LQSDENFPSC VTTVDEACYV RDPQVLPFHY  360
ACSEHHLLKG EGVAGGAFNT NQPCFATDIT AFSKTEYPLS HHARMFGLCS AVAIRLRSIY  420
TGSADFVLEF FLPLDCKNTE DQKQMLSSLS SVIQQSCRSL RVVTDQELQE EKELLQREKV  480
SLSAGESHEE ISRKPVSPPY RDQDASSWLS QMMDVQRKGK GAAVSQEENF KVTANHWRES  540
IHASTYSEPN QIQDNFGPKG GSGGSLDFSS GTGSHSSGAK RTGERRRSKT EKSISLQVLR  600
QYFAGSLKDA AKSIGVCPTT LKRICRQHGI TRWPSRKIKK VGHSLQKLQL VIDSVHGAEG  660
AIKLSSFYTN FPELTSPNNP GTSNLSASKN HDHMQQVNTQ PDGSTLSPDT ATSKSTSSSG  720
SHNSSSSLFC STGSKHLFPV TNVFSTGNAT MEEHPGGMLK RAHTEAESHD MGQEETKLLV  780
RSQSQKVQSN HISLEPLCPL PTSSNQVIRD SATFKVKATF GKEKIRFSLQ SHWGFIDVQQ  840
EVLRRFNIED GKIDLKYLDD DDEWVLLTCD ADLEECIDIH RLCKRRTIKI SLHHAYHPNL  900
GSSFGSSGPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	OIT35080