PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT35174

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 223aa MW: 25530.3 Da PI: 5.839

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT35174	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.1	2.3e-24	86	136	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kpr++Wt+eLHerFv+av +LGG+ +A P++i++ m+v Ltl+h+kSHLQ OIT35174 86 KPRMKWTEELHERFVNAVVELGGPWEAKPRAIKRKMQVRALTLYHIKSHLQ 136 79************************************************* PP
2	Myb_DNA-binding	51	3.2e-16	88	137	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r++WT+e++e++v+av +lGg+ +++I r+m+ +tl+++ks++q OIT35174 88 RMKWTEELHERFVNAVVELGGPweaKPRAIKRKMQvRALTLYHIKSHLQE 137 79********************************99********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MFPLVPFAMN DNARQYRRIP ILDRHFQEPL NPLPLNNVPA VANQNHQPLI FYGGMNVMNN 60 DDNHLRFFDG NVPQVEQEVD QPRLVKPRMK WTEELHERFV NAVVELGGPW EAKPRAIKRK 120 MQVRALTLYH IKSHLQEQMK EVATKFQTML PFEDQAGSSK SVPMLPHQFP SVVLAPAPVD 180 VYIPQPPTEA ADVHVPPEME DMVAQSIAEN SMEDFLRALE LAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.2	3e-20	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT35174