PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35271
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family YABBY
Protein Properties Length: 107aa    MW: 12380.1 Da    PI: 10.9875
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35271genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY129.93.4e-401273110170
     YABBY 110 prvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
               pr  + v+rPPekrqrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl
  OIT35271  12 PREERiVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 73 
               4444449*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MQAVRPSITS NPREERIVNR PPEKRQRVPS AYNQFIKEEI QRIKANNPDI THREAFSTAA  60
KNWAHFPHIH FGLTLETKNQ AKLGASENAE KHIMHRAALP NLKNFTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.11e-44YABBY family protein