PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT35291

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

GeBP

Protein Properties

Length: 701aa MW: 76563.4 Da PI: 4.5116

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT35291	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	70.4	3.5e-22	27	115	3	96
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 f+++ws+eDe++lL+G+i+f++++g + + ++ fy+++ +s+ ++++ +ql eK+r L+ K +k+v+ ++s +++h+ + f+ls+kiW OIT35291 27 FSKVWSDEDEVSLLKGIIKFRKEKGLDIQTNMLLFYNYIIDSLMLRATLTQLREKVRALRIKHEKNVSG-----KKSPKTPHEVELFQLSQKIW 115 899************************************************************9999.....567899************ PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MADDAGSGSS FTDQAQNQRT AQKLTPFSKV WSDEDEVSLL KGIIKFRKEK GLDIQTNMLL 60 FYNYIIDSLM LRATLTQLRE KVRALRIKHE KNVSGKKSPK TPHEVELFQL SQKIWMVNAK 120 ESEHQKEYVG GKSETPNTSE PRQPIKQNLL ENWMSEQHIP EIEQPTQEII PKIGLGSQHL 180 LVLLKRIAED VELVANAMSR SQRQVDGERS DLYFQSTDLL VKFGRVVKEI KAKPEMRHSS 240 ELLEQEILKA YLEAKIEHAQ LVSNAYNTFI QVDVAVAAPT KPMKKGKREA ENEIEKLVST 300 KKQKKHLAVA QAAEKKQSDA KAQKKKKKQE TSSCDDSSQP EDEKKLTEAA TPPKKVTPAK 360 NEKLASSSDD SDSYGEDEAP SKKAVATSSK NGLAAKKNDD PSDDSNSEED SSSEAKKPPA 420 NGSAAASKKD ESSDESSSED DSSSSEEEEA PAAASKKEES SDDDDDEPPS KVVSQPTKAP 480 QAVKKNSDSS EETDSDEDDS DSDKGKAAAV CKKEVPSSAD SDDESEDDTS GESDEEQRRK 540 KKIKPSSTPT VSNSRKESSF EEDVPAAKIP PANGSAAASK KNESSDESSA EDDSSSEEEE 600 EEDAVNEAPT AATSKMEESS DESSSDDEPS STPAVSKKES SSEESSDEVE SSEENEDEKP 660 SRTPKKQKTP IPPKAQTPGS KTLFVGNLPN SVEDGSFQGS C

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MADDAGSGSS FTDQAQNQRT AQKLTPFSKV WSDEDEVSLL KGIIKFRKEK GLDIQTNMLL  60
FYNYIIDSLM LRATLTQLRE KVRALRIKHE KNVSGKKSPK TPHEVELFQL SQKIWMVNAK  120
ESEHQKEYVG GKSETPNTSE PRQPIKQNLL ENWMSEQHIP EIEQPTQEII PKIGLGSQHL  180
LVLLKRIAED VELVANAMSR SQRQVDGERS DLYFQSTDLL VKFGRVVKEI KAKPEMRHSS  240
ELLEQEILKA YLEAKIEHAQ LVSNAYNTFI QVDVAVAAPT KPMKKGKREA ENEIEKLVST  300
KKQKKHLAVA QAAEKKQSDA KAQKKKKKQE TSSCDDSSQP EDEKKLTEAA TPPKKVTPAK  360
NEKLASSSDD SDSYGEDEAP SKKAVATSSK NGLAAKKNDD PSDDSNSEED SSSEAKKPPA  420
NGSAAASKKD ESSDESSSED DSSSSEEEEA PAAASKKEES SDDDDDEPPS KVVSQPTKAP  480
QAVKKNSDSS EETDSDEDDS DSDKGKAAAV CKKEVPSSAD SDDESEDDTS GESDEEQRRK  540
KKIKPSSTPT VSNSRKESSF EEDVPAAKIP PANGSAAASK KNESSDESSA EDDSSSEEEE  600
EEDAVNEAPT AATSKMEESS DESSSDDEPS STPAVSKKES SSEESSDEVE SSEENEDEKP  660
SRTPKKQKTP IPPKAQTPGS KTLFVGNLPN SVEDGSFQGS C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	4e-12	GeBP family protein

Link Out ? help Back to Top
Ensembl	OIT35291